Murphy Lab

Research
 Projects
 Publications
 Software
 Presentations
 Flow Cytometry

Services
 PSLID
 SLIF

Data
 Download

Affiliations
 Carnegie Mellon University
 Center for Bioimage Informatics
 Biological Sciences Department
 Biomedical Engineering Department
 Machine Learning Department
 MBIC

Murphy Lab - Imaging Services

PSLID provides a structured, well-annotated database of fluorescence microscope images depicting subcellular location proteins. Two interfaces are currently provided: a text and image content search interface and a graphical interface for exploring location patterns grouped into a Subcellular Location Tree.

The graphical interface for a set of mutants exploring uncovering enzyme TGN exit function is also available here.

Analyze on-line journal articles to find fluorescence microscope images depicting subcellular localization patterns.

SLIF is accessible as a Web database, via both an interactive interface and a programmatic (URL query) interface.

To rank a group of images in order of the degree to which they are representative (typical) of the set. Typicality is measured by calculating features that summarize each image.

This function is now available through PSLID.

To classify an image by its subcellular location pattern.

This function is now available through PSLID.